Install¶
Dependencies¶
To build MorphIO from sources, the following dependencies are required:
cmake >= 3.2
libhdf5-dev
A C++11 compiler
Debian:
sudo apt install cmake libhdf5-dev
Red Hat:
sudo yum install cmake3.x86_64 hdf5-devel.x86_64
Max OS:
brew install hdf5 cmake
Install as a C++ library¶
For manual installation:
git clone git@github.com:bluebrain/morphio.git --recursive
cd morphio
mkdir build && cd build
cmake ..
make install
To use the installed library:
find_package(MorphIO REQUIRED)
target_link_libraries(mylib MorphIO::morphio)
Install as a Python package¶
The python binding can directly be installed using pip:
pip install morphio