mito_section.h

#pragma once

#include <morphio/mitochondria.h>
#include <morphio/properties.h>
#include <morphio/section_base.h>
#include <morphio/types.h>

namespace morphio {
using mito_upstream_iterator = upstream_iterator_t<MitoSection>;
using mito_breadth_iterator = morphio::breadth_iterator_t<MitoSection, Mitochondria>;
using mito_depth_iterator = morphio::depth_iterator_t<MitoSection, Mitochondria>;

class MitoSection: public SectionBase<MitoSection>
{
    using SectionId = Property::MitoSection;
    using PointAttribute = Property::MitoDiameter;

  public:
    mito_depth_iterator depth_begin() const;
    mito_depth_iterator depth_end() const;

    mito_breadth_iterator breadth_begin() const;
    mito_breadth_iterator breadth_end() const;

    mito_upstream_iterator upstream_begin() const;
    mito_upstream_iterator upstream_end() const;

    range<const uint32_t> neuriteSectionIds() const;

    range<const floatType> diameters() const;

    range<const floatType> relativePathLengths() const;

  protected:
    MitoSection(uint32_t id_, const std::shared_ptr<Property::Properties>& morphology)
        : SectionBase(id_, morphology) {}
    friend MitoSection Mitochondria::section(uint32_t) const;
    friend class SectionBase<MitoSection>;
    friend class mut::MitoSection;
};
}  // namespace morphio